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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Rsa1.0_02402.1_g00002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
| Family |
G2-like |
| Protein Properties |
Length: 410aa MW: 46304.9 Da PI: 7.586 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Rsa1.0_02402.1_g00002.1 | genome | RGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 100.7 | 9.3e-32 | 85 | 138 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtpeLH +F++ave+LGG+++AtPk +l+lm+vkgL+++hvkSHLQ+YR+
Rsa1.0_02402.1_g00002.1 85 PRLRWTPELHLCFLQAVERLGGPDRATPKLVLQLMNVKGLSIAHVKSHLQMYRS 138
8****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 410 aa
Download sequence Send
to blast |
MTPSSQSSEN SKTCPSNNFK ATTTKEDDKD EEEEEEEDEE ERSADQSPSN NSYVEESGSH 60
HHHHNNDQIK KSGGSVRPYN RSKTPRLRWT PELHLCFLQA VERLGGPDRA TPKLVLQLMN 120
VKGLSIAHVK SHLQMYRSKK TDDLNQGDQG FSFEHGAGYP YNLSQLPMLQ SFDQGPSTSL 180
GRYSGGSWID HRRQVYRSPW RGLTTRDNTR TRQTLFSSQI GERFHGVSNS ILDDKNKTIS 240
FGTNSHDAVN ANNGIGEAVP RSHRSFLDGM KTFNKSWGQS FSSKPNSSMP SRPQNHIAMT 300
LNSHQRDNPR VGEETENDLK RKRLLLSDDY NKSNQDLDLS LSLKVPPTHN NLGECLLEEG 360
EKEHEDSKRL SLSLSSSTLS QHGRAIRKED QNDHKKRKIS VLASPLDLTL
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 3e-17 | 86 | 140 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 3e-17 | 86 | 140 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 2e-17 | 86 | 140 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-17 | 86 | 140 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-17 | 86 | 140 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-17 | 86 | 140 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 3e-17 | 86 | 140 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 3e-17 | 86 | 140 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 3e-17 | 86 | 140 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 3e-17 | 86 | 140 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 3e-17 | 86 | 140 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 3e-17 | 86 | 140 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC232572 | 0.0 | AC232572.1 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrS005G02, complete sequence. |
