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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_02163.1_g00007.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 277aa MW: 31502.1 Da PI: 7.6762 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_02163.1_g00007.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 107.7 | 5.7e-34 | 134 | 191 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s +prsYYrCt+++C+vkk+vers +dp++v++tYeg+Hnh+
Rsa1.0_02163.1_g00007.1 134 EDGYRWRKYGQKAVKNSSYPRSYYRCTTQKCNVKKRVERSFQDPSMVITTYEGKHNHP 191
8********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 277 aa
Download sequence Send
to blast |
MADHKNSSLE EKSFTSLTDC LQSSLVMDYN SLEKVFNNSS PFQPISPSNM GQIRNYPYLN 60 LNPNSPIVSS SSIEADPKES LGDKSGSMED NEGDQHGVGE SSKQLTKQGK EKGEKKEREA 120 RVAFMTKSEI DHLEDGYRWR KYGQKAVKNS SYPRSYYRCT TQKCNVKKRV ERSFQDPSMV 180 ITTYEGKHNH PIPSTLRGPV VSEHLLGHRG SCLFHRDHSF PRQHQEFLVM NQPPVNYQSV 240 GSKSYECTHL NNSNHQEVVD YGLLQDIVPS MLLKHES
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |