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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_02139.1_g00004.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 386aa MW: 42791 Da PI: 7.2469 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_02139.1_g00004.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 84.7 | 8.4e-27 | 208 | 267 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-.SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkvers.aedpkvveitYegeHnhe 59
+Dg++WrKYGqK+ k ++ pr+YYrC+++ +Cpv+k+v+r+ ++d+++ +tYeg+H+h+
Rsa1.0_02139.1_g00004.1 208 NDGCQWRKYGQKTAKANPLPRAYYRCSMSsNCPVRKQVQRCgEDDTSAYMTTYEGTHDHP 267
8***************************99**********934578899**********7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 386 aa
Download sequence Send
to blast |
MIKEKISSCV HPSDGVMAES DKEVELDATK AKLEKVREEN EKLKLLLSTV LTDYKSLQMH 60 VSRVFRPQHE ASMELDINSH DDFGVDISLR LGRPDLNVSK SVDEINKISL DKISDEISEG 120 SDKKRSALGL GFRIRSCEDL YTDQTMKLDC LCKDVKIKNV DNKCISSRKD VKAARNEDHQ 180 EVLEGQEQTG LKKTRVCVKA PCEDPSINDG CQWRKYGQKT AKANPLPRAY YRCSMSSNCP 240 VRKQVQRCGE DDTSAYMTTY EGTHDHPLPM EATNMAAGTS AAASLLQSGS SSSASLSCFF 300 PFHNVSFSTT NSHPTVTLDL TRPNYDPDQL PNYPLSSSSL SFSSSDRPSP SKSQTLSFSG 360 LRSHSPLIKY SQTASLSHQT KLSGQQ
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU912404 | 0.0 | EU912404.1 Brassica napus WRKY transcription factor 36 (WRKY36.1) mRNA, complete cds. |