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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_02039.1_g00005.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
bZIP |
Protein Properties |
Length: 484aa MW: 55754.1 Da PI: 9.9596 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_02039.1_g00005.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 23.6 | 1.1e-07 | 207 | 227 | 6 | 26 |
HHHCHHHHHHHHHHHHHHHHH CS
bZIP_1 6 rerrkqkNReAArrsRqRKka 26
+ +r++kNRe+A rsR+RK++
Rsa1.0_02039.1_g00005.1 207 KHKRMIKNRESAARSRARKQE 227
679*****************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 484 aa
Download sequence Send
to blast |
MMSSAKHQRN HRVSATNKNK ILNTFSSISS SSPPSSSSSS SPSYSQDSQE AQKSSLITME 60 EVWEDINLAS IHHLNRHSQH PQHNHEPRFR SHDHQNQNHD SMFQDFLNRP LNREPNMPTS 120 LNGNTTTVTA LFSSSPLGAP PATVLSLNSG AGFEFLDNRD PLVIPNSNLH SHNHLTDVPS 180 FNTSFEDLTC FGKKRGHESN EGSGNTKHKR MIKNRESAAR SRARKQECFL GFDSYLQAYT 240 NELEIEVAHL EAENERLRRQ QEQLRMAAAN QPPKKKTLQR RRTRYQRRRR PTLAYLHLFF 300 AATRSPPSLP ICLRSLDLGF CYGDRSARGE DLRWCLLLFW YRGEVVEVMI RSGGRILEFC 360 EDIVFSFDFL SLFRCWGARF RNSFYPLFLL WGRVASVHWS QLPWMLILDG QSLLQPRPLL 420 PAVNKTCSGS CYRFRRGVIV RIRRVENPFK VQWRDLVGIE GLSPWSSYLV LFVDEFPLGK 480 LVFE
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 273 | 289 | KKKTLQRRRTRYQRRRR |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Publications
? help Back to Top |
- Ho WW,Weigel D
Structural features determining flower-promoting activity of Arabidopsis FLOWERING LOCUS T. Plant Cell, 2014. 26(2): p. 552-64 [PMID:24532592] - Ji H, et al.
Downregulation of leaf flavin content induces early flowering and photoperiod gene expression in Arabidopsis. BMC Plant Biol., 2014. 14: p. 237 [PMID:25201173] - Li L, et al.
Expression of turtle riboflavin-binding protein represses mitochondrial electron transport gene expression and promotes flowering in Arabidopsis. BMC Plant Biol., 2014. 14: p. 381 [PMID:25547226] - Sussmilch FC, et al.
Pea VEGETATIVE2 Is an FD Homolog That Is Essential for Flowering and Compound Inflorescence Development. Plant Cell, 2015. 27(4): p. 1046-60 [PMID:25804541] - Khan M, et al.
Repression of Lateral Organ Boundary Genes by PENNYWISE and POUND-FOOLISH Is Essential for Meristem Maintenance and Flowering in Arabidopsis. Plant Physiol., 2015. 169(3): p. 2166-86 [PMID:26417006] - Andrés F, et al.
Floral Induction in Arabidopsis by FLOWERING LOCUS T Requires Direct Repression of BLADE-ON-PETIOLE Genes by the Homeodomain Protein PENNYWISE. Plant Physiol., 2015. 169(3): p. 2187-99 [PMID:26417007] - Kawamoto N,Endo M,Araki T
Expression of a kinase-dead form of CPK33 involved in florigen complex formation causes delayed flowering. Plant Signal Behav, 2015. 10(12): p. e1086856 [PMID:26440648] - Zhang L,Yu H,Lin S,Gao Y
Molecular Characterization of FT and FD Homologs from Eriobotrya deflexa Nakai forma koshunensis. Front Plant Sci, 2016. 7: p. 8 [PMID:26834775] - Hou CJ,Yang CH
Comparative analysis of the pteridophyte Adiantum MFT ortholog reveals the specificity of combined FT/MFT C and N terminal interaction with FD for the regulation of the downstream gene AP1. Plant Mol. Biol., 2016. 91(4-5): p. 563-79 [PMID:27216814] - Jung JH,Lee HJ,Ryu JY,Park CM
SPL3/4/5 Integrate Developmental Aging and Photoperiodic Signals into the FT-FD Module in Arabidopsis Flowering. Mol Plant, 2016. 9(12): p. 1647-1659 [PMID:27815142] - Jang S,Li HY,Kuo ML
Ectopic expression of Arabidopsis FD and FD PARALOGUE in rice results in dwarfism with size reduction of spikelets. Sci Rep, 2017. 7: p. 44477 [PMID:28290557]
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