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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_01989.1_g00006.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
M-type_MADS |
Protein Properties |
Length: 157aa MW: 17933.4 Da PI: 10.2078 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_01989.1_g00006.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 64.6 | 1e-20 | 14 | 62 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
+++++s + +++ R+ +i+KKA+EL +LCd+e++vi ++++g+l++++
Rsa1.0_01989.1_g00006.1 14 SSSSYSLAATSLQGRLLTIFKKAQELTTLCDIEACVIHYGPDGELRTWP 62
799*********************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 157 aa
Download sequence Send
to blast |
MRSPRPHSCS KSSSSSSYSL AATSLQGRLL TIFKKAQELT TLCDIEACVI HYGPDGELRT 60 WPENRDQVRD LAKRRKKSVN LYEFLNKMKT KNKKMTNNFK KKANRNVEEL KYPSSDHYYS 120 VDQINQLIQS LELSSSKLQS LSFGKGKLEG ASTFFEV
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |