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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_01853.1_g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 521aa MW: 57697.8 Da PI: 6.713 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_01853.1_g00001.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 94.2 | 9.6e-30 | 232 | 291 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r++ed ++++ tYeg+Hnh+
Rsa1.0_01853.1_g00001.1 232 MNDGCQWRKYGQKIAKGNPCPRAYYRCTIApSCPVRKQVQRCSEDMSILISTYEGTHNHP 291
58***************************99****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 521 aa
Download sequence Send
to blast |
MENEDFLRSS GHGREERHED TRKLISSSDD SHQEHNLIIR SKLESIRVEM EEAKEENRRL 60 KSSLNRTKRD FEILQIQYNQ LMVQHEDPNK FSPKSHHQDK DKDEDKGNIS KREELVLLSL 120 GSMTNKEEKG KGLMDEIGDR KQIDEHDKRN EQGLSMGLEY KDLSNPSEKL EIDHSQEKTT 180 LEVSNSNKIP SENSFGLKND GDDHEDEEEL LPQNLVKKTR VSVRSRCETP TMNDGCQWRK 240 YGQKIAKGNP CPRAYYRCTI APSCPVRKQV QRCSEDMSIL ISTYEGTHNH PLPASATAMA 300 AATSAAASML LSGASSSGAA DLHGLNFSLS GNPKPKSPSL QTSFSPSSSG HPTVTLDLTA 360 SSSSQQTFLS MLNRFSAPPS NVSRSNSYPS TNLNFSNNTN TLMNWGGSSG HLNEKYRAAY 420 GNIGTHQQSP YHHMIQTQPA GSSFDTFGRS SSSSLHPTKT NLDHVGIKNI THQVQSLPAE 480 TIKAITTDPS FQSALATALS SIMGGDLKMD NVTKDEAKES S
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |