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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_01783.1_g00009.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
SRS |
Protein Properties |
Length: 188aa MW: 20737.4 Da PI: 10.1414 |
Description |
SRS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_01783.1_g00009.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF702 | 152.9 | 2.3e-47 | 40 | 178 | 4 | 154 |
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsst 89
++ C+dCGn+akk+C +eRCRtCCksrg++CathvkstWvp++ ++ ++++++k+ + ++s+k s
Rsa1.0_01783.1_g00009.1 40 EEKVCKDCGNRAKKECLFERCRTCCKSRGYNCATHVKSTWVPSSAATRS----SS--------SSSDRNKKLKLHSSDK--PKSVL 111
6789**************************************9765431....12........2233333333332222..23334 PP
DUF702 90 klssaeskkeletss.lPeevsseavfrcvrvssvdd.geeelaYqtavsigGhvfkGiLydqGlee 154
+++++s++e+++++ lP +++++a+fr++rv++v++ +++e++Yq++v+i+GhvfkG+L+++G+++
Rsa1.0_01783.1_g00009.1 112 IVPTTTSRQETSFKEgLPGKIEAPAIFRRTRVTAVSNnEQAEIGYQATVTISGHVFKGFLHYYGADH 178
4455555555555555*******************9868899**********************998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 188 aa
Download sequence Send
to blast |
MLGLRNTIFL PQPPSQVTSS VNFAAVEENN KSSRNSSNVE EKVCKDCGNR AKKECLFERC 60 RTCCKSRGYN CATHVKSTWV PSSAATRSSS SSSDRNKKLK LHSSDKPKSV LIVPTTTSRQ 120 ETSFKEGLPG KIEAPAIFRR TRVTAVSNNE QAEIGYQATV TISGHVFKGF LHYYGADHNK 180 AFPCLSNK
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM) (By similarity). {ECO:0000250}. |