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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_01771.1_g00003.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
bZIP |
Protein Properties |
Length: 371aa MW: 40351.5 Da PI: 4.5892 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_01771.1_g00003.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 48.1 | 2.6e-15 | 211 | 266 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58
++kr+rr+ +NRe+ArrsR+RK++ + L+ v +L e ++L k+l ++++v++
Rsa1.0_01771.1_g00003.1 211 DVKRARRMLSNRESARRSRRRKQEHMSDLASQVGQLRDEHSTLLKRLGAMNQKVST 266
68*********************************************999998875 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 371 aa
Download sequence Send
to blast |
MKSGFSADDS TDSFCPPPQP SPPPSPPQAQ GEGLTRSQSE WAFQMLLEEI SGSSISSTDN 60 ATGRSSPHVQ SESSVSKPEE PSSDDVVEIQ KPPHNGSRNR TPSSSSVDEM DPKFLQSKLE 120 LACAAAVALR MVGTVTPEYS SALKQVSPVG SQTQGPQMSP AVSSVSDAPS LDTQKQQDIQ 180 SRLATSVSDD SDDDDPDGET VTTVNADDPT DVKRARRMLS NRESARRSRR RKQEHMSDLA 240 SQVGQLRDEH STLLKRLGAM NQKVSTAVVD NRVLKAELET MRTKVKMAED TVKRMTGINP 300 MVLATPYSVR FDRTLMDSSQ PNLNQPDMIP NQGSDNESFA SNTVVTLETS CIAFETLPHW 360 DLEAGENKPQ E
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 225 | 232 | RRSRRRKQ |
2 | 227 | 232 | SRRRKQ |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds to the 5'-ACGT-3' box, especially present in G-box-like motif (5'-CCACGTGGCC-3'), ABRE elements, of seed storage protein (SSP) encoding gene promoters (e.g. At2S and CRU3) and promotes their expression in seeds when in complex with ABI3 and BZIP53. {ECO:0000269|PubMed:12657652, ECO:0000269|PubMed:19261733, ECO:0000269|PubMed:19531597}. |
Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] - Jain P, et al.
A-ZIP53, a dominant negative reveals the molecular mechanism of heterodimerization between bZIP53, bZIP10 and bZIP25 involved in Arabidopsis seed maturation. Sci Rep, 2017. 7(1): p. 14343 [PMID:29084982] - Pedrotti L, et al.
Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness. Plant Cell, 2018. 30(2): p. 495-509 [PMID:29348240]
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