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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Rsa1.0_01695.1_g00006.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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| Family |
TCP |
| Protein Properties |
Length: 436aa MW: 50133.8 Da PI: 7.7831 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Rsa1.0_01695.1_g00006.1 | genome | RGD | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 121.2 | 1.2e-37 | 152 | 313 | 2 | 133 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...................... 65
+ ++drhski T++g RdRR+Rls+++a+++F Lqd+LGfdk+skt+eWLl+qakp+i++++++
Rsa1.0_01695.1_g00006.1 152 PSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTVEWLLTQAKPEIIKIANSlsnqfnhggfssgddsqtrpal 237
5799************************************************************9999999988887777666655 PP
TCP 66 .ssssasec....eaesssssasnsssg.................kaaksaakskksqksaasalnlakesrakarararertrek 129
s++++s+ + + ++ k+k s +++ +++k+ rakar+ra++rt ek
Rsa1.0_01695.1_g00006.1 238 gSAETSSDLcelaS-------------MwtvedrgsntsmtenkvDGRTMRGKRKMS-QRTPILKEMSKDARAKARERAKDRTMEK 309
53333333323332.............022222222244455443333333333333.33334678888***************** PP
TCP 130 mrik 133
+++
Rsa1.0_01695.1_g00006.1 310 IMKR 313
8876 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 436 aa
Download sequence Send
to blast |
MNNNKTFSTT STINEDYMSF PYSDNYCSQP LLPFSPSSSI NDLLIHSNSN TENNHLDHHH 60
HRFLQAPSPF SQFEFVQDFP HLPSFLPQNI GHNDNQPITT NDHHHHPSLL PLNNTIGESQ 120
LIEPSESITT HNEDSQRIST SQDPKMKKVK KPSRTDRHSK IKTAKGTRDR RMRLSLDVAK 180
ELFGLQDMLG FDKASKTVEW LLTQAKPEII KIANSLSNQF NHGGFSSGDD SQTRPALGSA 240
ETSSDLCELA SMWTVEDRGS NTSMTENKVD GRTMRGKRKM SQRTPILKEM SKDARAKARE 300
RAKDRTMEKI MKRRPQVNSV EEVEAHNQRD EVVKKNNNTD VNWTNSFEAM PCREDTEELC 360
KNNRFSVYND FVVNKKDHIS DESYNMISKL NSSFPVLTHH RSQGVATFME QQQQQVRDVY 420
HFLGKPRDFM YCDNIR
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that prevents axillary bud outgrowth and delays early axillary bud development. Indirectly required for the auxin-induced control of apical dominance. {ECO:0000269|PubMed:17307924, ECO:0000269|PubMed:17452340}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced during environmentally induced bud dormancy (planting density). Repressed transiently after shoot apical meristem (SAM) decapitation (release from apical dominance). {ECO:0000269|PubMed:17307924}. |
| Publications
? help Back to Top |
- Lewis JM, et al.
Overexpression of the maize Teosinte Branched1 gene in wheat suppresses tiller development.
Plant Cell Rep., 2008. 27(7): p. 1217-25
[PMID:18392625] - Niwa M,Endo M,Araki T
Florigen is involved in axillary bud development at multiple stages in Arabidopsis.
Plant Signal Behav, 2013. 8(11): p. e27167
[PMID:24305631] - González-Grandío E,Cubas P
Identification of gene functions associated to active and dormant buds in Arabidopsis.
Plant Signal Behav, 2014. 9(2): p. e27994
[PMID:24518068] - Stes E, et al.
Strigolactones as an auxiliary hormonal defence mechanism against leafy gall syndrome in Arabidopsis thaliana.
J. Exp. Bot., 2015. 66(16): p. 5123-34
[PMID:26136271] - Yao C,Finlayson SA
Abscisic Acid Is a General Negative Regulator of Arabidopsis Axillary Bud Growth.
Plant Physiol., 2015. 169(1): p. 611-26
[PMID:26149576] - González-Grandío E, et al.
Abscisic acid signaling is controlled by a BRANCHED1/HD-ZIP I cascade in Arabidopsis axillary buds.
Proc. Natl. Acad. Sci. U.S.A., 2017. 114(2): p. E245-E254
[PMID:28028241] - Seale M,Bennett T,Leyser O
BRC1 expression regulates bud activation potential but is not necessary or sufficient for bud growth inhibition in Arabidopsis.
Development, 2017. 144(9): p. 1661-1673
[PMID:28289131] - Otori K,Tamoi M,Tanabe N,Shigeoka S
Enhancements in sucrose biosynthesis capacity affect shoot branching in Arabidopsis.
Biosci. Biotechnol. Biochem., 2017. 81(8): p. 1470-1477
[PMID:28471323] - Lantzouni O,Klermund C,Schwechheimer C
Largely additive effects of gibberellin and strigolactone on gene expression in Arabidopsis thaliana seedlings.
Plant J., 2017. 92(5): p. 924-938
[PMID:28977719] - Yang Y, et al.
The TIE1 transcriptional repressor controls shoot branching by directly repressing BRANCHED1 in Arabidopsis.
PLoS Genet., 2018. 14(3): p. e1007296
[PMID:29570704]
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