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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_01643.1_g00004.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
ERF |
Protein Properties |
Length: 222aa MW: 24441.1 Da PI: 5.7533 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_01643.1_g00004.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.4 | 9.7e-20 | 111 | 161 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +g+W+A Irdp + +r++lg+f+tae Aa+a+++a+++++g+
Rsa1.0_01643.1_g00004.1 111 RYRGVRQRP-WGKWAAGIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRGN 161
7********.**********7.....337*************************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 222 aa
Download sequence Send
to blast |
MANQGGQDEF RADYPEGTKP AIDDVYSFED DPVVGRFNRF GTEMSAMVSA LTQVVSARSL 60 TSSTVDTHSS SSSAGLKRER LGIDRVDSSP GPIEECTNNG LPEEAKEKKR RYRGVRQRPW 120 GKWAAGIRDP HKAARVWLGT FDTAEAAARA YDEAALRFRG NKAKLNFTED VKILPPRPHL 180 IPQADEGNEV RNDTLEHSPM EQPLLPLDSA PNSSDFRGPS SA
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |