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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Rsa1.0_01641.1_g00003.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 511aa MW: 56696.5 Da PI: 5.8632 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_01641.1_g00003.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 90.7 | 1.2e-28 | 265 | 321 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
Dgy+WrKYGqK vk +++prsYY C+++gC+vkk+ver+a+d k++++ Y+g+H h+
Rsa1.0_01641.1_g00003.1 265 DGYRWRKYGQKIVKANPNPRSYYICSYSGCNVKKHVERAADDVKILVVSYNGRHVHP 321
9*******************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 511 aa
Download sequence Send
to blast |
MSDYSDGNFM DMVSHWTSLP SPILGEIVAM PDQTDNGLNP ISNTFLPTNQ SEKKTSLVER 60 VSTRVGRNIP PLRIENLRPS ALFKNKKTVL GVNEISPGLS PSVMLQSPSQ LISPFSFPND 120 WPPETVENPG DDHAATMIFN NNVPYQPMHF DLPPQEGSYM MVPVTGNSAY IPSHESQVDP 180 IGAPLVASFE SELADDPDFS KLLSFPLDDE SESQEDDDIA GELEIKPSSP KRRKYEASDM 240 ITAGITSKDP SVIIRMETEE DQPCDGYRWR KYGQKIVKAN PNPRSYYICS YSGCNVKKHV 300 ERAADDVKIL VVSYNGRHVH PEPGPRSSSS SGPKNRPRSS VAARLGRPPF SSSSAARDKR 360 PLATQNMRPF AYPSASATQD MRPFPSSLNS GVDMTHLYKT GLSKMPSLPV NQTHGLMGQN 420 AEPWINQNHG LMGQNAEPWV NQNHGFMDQN AEPWVNQNHG FMGDNVEPCI NQNHGLMGQN 480 DKPKTDHVIP DGTEVYKWIM ERLLANFGVK H
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