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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Rsa1.0_01428.1_g00002.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
Trihelix |
Protein Properties |
Length: 298aa MW: 33481.9 Da PI: 10.2814 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_01428.1_g00002.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 73 | 5.4e-23 | 64 | 144 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
Wt++e+l+Li+ +++++ +++rg l+ ++Wee+s ++ + g+ers++qC++k+e+l+kr+k+++++++ s +p+++q++
Rsa1.0_01428.1_g00002.1 64 WTEDETLLLIDSYKQKWYAVGRGPLRSNQWEEISVAVsGRSGVERSATQCRHKMEKLRKRFKAERQSMGPI-----SIWPFYSQMD 144
***********************************998899****************************84.....68*******8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 298 aa
Download sequence Send
to blast |
MATPSPTPSP PSDSNPNHAA TPPHQNPPPS NSTAIQTPPS PQTTVVALAA STSAVARKTQ 60 PVLWTEDETL LLIDSYKQKW YAVGRGPLRS NQWEEISVAV SGRSGVERSA TQCRHKMEKL 120 RKRFKAERQS MGPISIWPFY SQMDELDCNP APISARPLTR LPPPSNHYAE DEEDEDEEED 180 ERRNKSRSIN HIVRRPGTVN RFAGVGGGLL QWGQKERSKR KRTDEGGGGG ERRMKGARAV 240 AYEIRAFAEK TMVMEKKKME FAKETLKLRK DMEIKRLKLI QTSQAQLLQF LNTSFASF
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