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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_01419.1_g00002.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
bZIP |
Protein Properties |
Length: 177aa MW: 19398.5 Da PI: 6.0138 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_01419.1_g00002.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 40.6 | 5.7e-13 | 38 | 76 | 5 | 43 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43
++ +rkq+NRe+ArrsR RK++ ++ L+ v+ L +eN
Rsa1.0_01419.1_g00002.1 38 RKRKRKQSNRESARRSRMRKQQHLDDLAAQVAHLRKENG 76
5789**********************************6 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009845 | Biological Process | seed germination |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 177 aa
Download sequence Send
to blast |
MNKTELGSPT SNSSVSTIGS QNSGLESDLR QRDLLDERKR KRKQSNRESA RRSRMRKQQH 60 LDDLAAQVAH LRKENGHIVA GIAVTTEHYV TIEAENSILR AQLLELNHRL DSLNEIVDFV 120 ESSSLEMETG QGGGLIDYSG PSGGGGFYDG LMNTLNLGFY NQPIMASAST AGDVFNC
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 37 | 42 | RKRKRK |
2 | 50 | 57 | RRSRMRKQ |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}. |