PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_01388.1_g00008.1
Organism
Raphanus sativus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family BES1
Protein Properties Length: 678aa    MW: 74340 Da    PI: 8.3457
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_01388.1_g00008.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822182.32.2e-563714831110
                   DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaag. 83 
                              ++++r+ptw+ErEnnkrRERrRRaiaaki++GLR++Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkgs+++  e++e++g 
  Rsa1.0_01388.1_g00008.1 371 TSGTRTPTWRERENNKRRERRRRAIAAKIFTGLRMYGNYELPKHCDNNEVLKALCNEAGWIVEQDGTTYRKGSSRPvlERMEIGGv 456
                              5899*********************************************************************9998999998873 PP

                   DUF822  84 ssasaspesslqsslkssalaspvesy 110
                               sa++sp++s++ s++ss++ sp  + 
  Rsa1.0_01388.1_g00008.1 457 GSATTSPCASYNPSPVSSNFMSPSYAN 483
                              577888888888777777777765433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.1130.106.2E-731220No hitNo description
SuperFamilySSF695932.75E-1549220No hitNo description
CDDcd079892.23E-3256229No hitNo description
PfamPF015533.7E-2156182IPR002123Phospholipid/glycerol acyltransferase
PRINTSPR009794.4E-266180IPR000872Tafazzin
SMARTSM005632.9E-2661186IPR002123Phospholipid/glycerol acyltransferase
PRINTSPR009794.4E-2692103IPR000872Tafazzin
PRINTSPR009794.4E-26106121IPR000872Tafazzin
PRINTSPR009794.4E-26138152IPR000872Tafazzin
PRINTSPR009794.4E-26161182IPR000872Tafazzin
PRINTSPR009794.4E-26204217IPR000872Tafazzin
PfamPF056874.0E-52372482IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006650Biological Processglycerophospholipid metabolic process
GO:0005886Cellular Componentplasma membrane
GO:0016746Molecular Functiontransferase activity, transferring acyl groups
Sequence ? help Back to Top
Protein Sequence    Length: 678 aa     Download sequence    Send to blast
MGRIMEWAAR SDHLRGVPRK AVITAVGAFA RAVANLCNKT TAHNADTLMT LVRSRPPGVP  60
LITVSNHMST LDDPVMWGGF KGLLSFDPEL ARWVLAAEDI CFKNPVFSYI FRTGKCIPIT  120
RGGGIYQEHM SEALERLKDG SWLHTFPEGK VFQEDVPIRR LKWGTASLIA RCPVTPIVLP  180
IIHRGFDEMM PEKYFYGRRP PLPLCNKNLK VVVGEPIEFD LPMMVQTAVS ASSDHVTEDT  240
LQEAKWPVIS SAGQKLDETA QRCLYTALSQ KIQSSLESLR LLAKRLNSFE TTSLNRERRF  300
CEDTNTRRPR ETIELATGAA SGVYANVYGP HRITPGTHHH VEKEPSKGVS ENGFVALSSK  360
TEEGESTRAM TSGTRTPTWR ERENNKRRER RRRAIAAKIF TGLRMYGNYE LPKHCDNNEV  420
LKALCNEAGW IVEQDGTTYR KGSSRPVLER MEIGGVGSAT TSPCASYNPS PVSSNFMSPS  480
YANLTSGDGQ SLIPWLKHLS TTSSSFYIPG GSISAPVTPP LSSPTATTNP DHWQQQLNSS  540
FFVSSTPPSP TRQQQQTVVP DSEWFSGIQL AQSVPASPTF SLVSSRNPFG FREDQLASAG  600
VGGGGSRMWT PGQSGTCSPV IQTGDVPMSE AVVAPPEFAF GSSTTKGLVK AWEGERIHEE  660
SGSDDLELTL GNSSTKGN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-20375442372439Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-20375442372439Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-20375442372439Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-20375442372439Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Cis-element ? help Back to Top
SourceLink
PlantRegMapRsa1.0_01388.1_g00008.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-125BES1/BZR1 homolog 4