 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Rsa1.0_01001.1_g00002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
| Family |
ERF |
| Protein Properties |
Length: 190aa MW: 21666.4 Da PI: 9.6414 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Rsa1.0_01001.1_g00002.1 | genome | RGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 64 | 3.1e-20 | 60 | 109 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
ykGVr+++ +g+++AeIrdp + k +r +lg++ t+eeAa a+++a+ k++g
Rsa1.0_01001.1_g00002.1 60 YKGVRRRP-WGKYAAEIRDP---NkKGTRMWLGTYETPEEAAVAYDQAAFKMRG 109
9*******.**********9...4345*************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 190 aa
Download sequence Send
to blast |
MKMEGKHSSN NGSAVLNWIR RELLEEDDID MDLTPSTTLA TDSSSSSEDV RVAPRRGATY 60
KGVRRRPWGK YAAEIRDPNK KGTRMWLGTY ETPEEAAVAY DQAAFKMRGS KAKLNFPHLI 120
SCPHEAEAVK EEEEVTHCGN KRQRSQEHNH HPVVVAKRRN NINIINQMAR LPSLGLKSVF 180
KNTYDDFMRL
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT2G44840.1 | 3e-36 | ethylene-responsive element binding factor 13 |
