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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00991.1_g00024.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
bHLH |
Protein Properties |
Length: 355aa MW: 38240.8 Da PI: 8.969 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00991.1_g00024.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 32.9 | 1.2e-10 | 270 | 315 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+++Er RR ri ++ +L++l+P+ +k s +++L +Av++Ik Lq
Rsa1.0_00991.1_g00024.1 270 SIAERERRTRISGRLKKLQDLVPNM----DKQTSYSDMLDLAVQHIKGLQ 315
689*********************7....688*****************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010119 | Biological Process | regulation of stomatal movement |
GO:0005829 | Cellular Component | cytosol |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 355 aa
Download sequence Send
to blast |
GLIRYGSAPG SLLNSMVDEV IGGSNARDFN FPQPDNFLGD FFAGADSSSL RSESMTCGVN 60 SSGGQKHLGN DNNNNNNKDL LLDRSYGGFN EISQHKSINN VGGGGGGSSS GSYSLARQRS 120 SPADFFSYLS GEKNSFSLNQ PTSDYNQQGG SNAGRGPSRL KSQLSFTSHD PLSRISEVNE 180 TSVHEGSGHS FSAAGFGAAT DSWDDGSGSI GFTVTRPTKR PKDMSSGLFS QYSLPSDTSM 240 NYMDNYMQLP EDSVPCKVRA KRGFATHPRS IAERERRTRI SGRLKKLQDL VPNMDKQTSY 300 SDMLDLAVQH IKGLQNQLQN KRTARANAVR DQASLVVQPN GRDAARDQAS LAVQP
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF317549 | 0.0 | KF317549.1 Brassica oleracea var. capitata PA1 (PA1) mRNA, complete cds. |