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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00973.1_g00004.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 327aa MW: 37563 Da PI: 6.3277 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00973.1_g00004.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 97.6 | 7.9e-31 | 198 | 257 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK+ kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+
Rsa1.0_00973.1_g00004.1 198 MNDGCQWRKYGQKTAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 257
58***************************99****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MGMDLSLKLE KEKDERSKHS CEREEEEDAS ENKDEKMVKE DKIEDSCLSS RIREEEKERE 60 EVQIEMEHVK EENKRLRKLV EKTLQDYHQL EMKFPVIDQT NKMDFETFLG EQAKDWKRGV 120 ERYDSLNLVD GELGISLSLP KKQKQDEKKE AESNNKQIYN QSNIVHGQDI NTQRVITSSP 180 GNRKARVSVR ARCDTPTMND GCQWRKYGQK TAKGNPCPRA YYRCTVAPGC PVRKQVQRCL 240 EDMSILITTY EGTHNHPLPV GATAMASTAS TSPFLLLDSS DNLSHPSYLQ QNGSNNQSLR 300 SLINFDDPSF RGGDHVSSSQ NRLNWMV
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by potassium deprivation. {ECO:0000269|PubMed:15173595}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF430032 | 0.0 | KF430032.1 Brassica rapa WRKY transcription factor 9 (WRKY9) mRNA, complete cds. |