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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00970.1_g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 311aa MW: 34495.8 Da PI: 6.6341 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00970.1_g00001.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 106.1 | 1.8e-33 | 164 | 221 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s +prsYYrCt+++C+vkk+vers +dp+vv++tYeg+Hnh+
Rsa1.0_00970.1_g00001.1 164 EDGYRWRKYGQKAVKNSIYPRSYYRCTTQKCNVKKRVERSFQDPTVVITTYEGQHNHP 221
8********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 311 aa
Download sequence Send
to blast |
MSNESKDLYN YQYPPSFSLY ELMTLPTSTP SYGNNGYGPP SYSLADCLQS SPGAYDSLLP 60 KTSAPSPSSS EVFNSYIDQE SKREVSIDVI GETPTRVSAS SSASEADHPG EDSGKGQKKR 120 ELVGDGGEEN QSSKKVGKSK KNEEKKQREP RVSFMTKSEV DHLEDGYRWR KYGQKAVKNS 180 IYPRSYYRCT TQKCNVKKRV ERSFQDPTVV ITTYEGQHNH PLPTNLRGSS AAAAMYSADF 240 ITPGSFTHDM FRSSAYTSGG SAATAFDYGS YEQSGYGSVN ANPSTHQEYH QGGEYELLKE 300 IFPSIFFKQE P
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |