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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00944.1_g00013.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
bZIP |
Protein Properties |
Length: 448aa MW: 49681.8 Da PI: 6.3634 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00944.1_g00013.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 28.8 | 2.6e-09 | 301 | 358 | 5 | 62 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
kr +r NR +A rs +RK +i eLe kv++L++e ++L + l+ + l+++
Rsa1.0_00944.1_g00013.1 301 KRVKRILANRQSAARSKERKMRYIVELEHKVQTLQTEATTLSAQFTLLQRDMMVLTNQ 358
899***************************************9998888777666665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 448 aa
Download sequence Send
to blast |
MGDTDTDMIH TSIPKQPHQL ELNPNHIHFS SDSTRRVGVP PTSPYSQIPT TRPQQPQGAT 60 HSRSRSRSMS QPSSFFSFDS LPPLSPSPFS FNNNNTSSPL LLPPSSPFTR CNSDSSSSRA 120 VLPPRKSHRR SNSDIHIPTC FNSPIPPFVK REDMDDDLFS AYMNLENIDA LNSSEADDDN 180 NDNSKNGESS RASGTTKTSD DTEEGESSSV NYESDRNNTL KRRADGGGGG GGGGGDVAPT 240 TRHYRSVSVD SCFMEKLSFG EEVSPTNSVS IEFKKGEFTA AEMKKIMAND KLAEMAMSDP 300 KRVKRILANR QSAARSKERK MRYIVELEHK VQTLQTEATT LSAQFTLLQR DMMVLTNQNN 360 ELKFRLQAME QQAQLRDALN EALSGEVQRL KLAIGETSHN EADRSKMQSL NADMFQQLNI 420 SQLTQQPQPQ SQQNQNGTMS PKPESNEL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AY080839 | 1e-148 | AY080839.1 Arabidopsis thaliana unknown protein (At4g38900) mRNA, complete cds. |
GenBank | AY150435 | 1e-148 | AY150435.1 Arabidopsis thaliana unknown protein (At4g38900) mRNA, complete cds. |