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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00816.1_g00006.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
bZIP |
Protein Properties |
Length: 339aa MW: 37565.4 Da PI: 10.0005 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00816.1_g00006.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 30.6 | 7.1e-10 | 43 | 83 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L
Rsa1.0_00816.1_g00006.1 43 KTVRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 83
7789************************9877777766555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MADMSPITDV STDGDRDLGS EGALVNTAAS DSSERSKNKL DQKTVRRLAQ NREAARKSRL 60 RKKAYVQQLE NSRLKLTQLE QELQRARQQG VFISSTGDQA HSTGGNGALA FDAEYSRWLE 120 EKNKRMNELR SALNAHAGDG ELRIIVDGVM AHYEELFRIK SNAAKNDVFH LLYGMWASVH 180 PKFSRSVSKL HSSSSVSVEM NNVVCKKKQL LANQLEPMTE RQVMGINSLQ ETSQQAEDAL 240 SQGMESLQQS LADTLSSGTL GSSSSGNVAS YMGQMAMAMG KLGTLEGFIR QADNLRLQTL 300 QQMIRVLTTR QSARALLAIH DYSSRLRALS SLWLARPRE
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK353125 | 1e-149 | AK353125.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-10-O14. |