 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Rsa1.0_00802.1_g00014.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
Family |
M-type_MADS |
Protein Properties |
Length: 338aa MW: 38894.4 Da PI: 5.4341 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00802.1_g00014.1 | genome | RGD | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 60.2 | 2.6e-19 | 15 | 61 | 4 | 50 |
-SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
+++s + +++ R+ +i+KKA+EL +LCd+e++vi ++++g+l++++
Rsa1.0_00802.1_g00014.1 15 SSYSLAATSLKSRLLTIFKKAQELTTLCDIEACVIHYGPEGELRTWP 61
78999*****************************************8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 338 aa
Download sequence Send
to blast |
MRPPLSSSCS NSSPSSYSLA ATSLKSRLLT IFKKAQELTT LCDIEACVIH YGPEGELRTW 60 PENRDKVRDL ALRYIQLDEA KRRKKSLNLY EFLNKNKKTT MTTNNFKKRA QKKNVEEELK 120 YPISDHYSVD QINQLIHSLE LSYSTLQERR RFLPAKKQSE SLNPNQFTPL PRESVLKNQE 180 FCVYDQKNNN SFQHLCVSAA QESGLHYQFM PYGGYYDQNM FVGNNYQDPC VSSNTQDYSV 240 FPLELQESVS NYELNQLMQH ELYGLDQNMC LGDTTNSNVL DPCLSDDFCF DFQNIYGGNL 300 VGNPSFSQDF NIDMSSSYVD ENRLLQASTL PSLYLQSS
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |