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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00796.1_g00007.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 302aa MW: 34194.7 Da PI: 6.5577 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00796.1_g00007.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 86.2 | 2.9e-27 | 109 | 170 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
ldDg++WrKYGqK++ g++fpr+YYrCt++ gC+++k+v+rs+e++ ++ei Y+g H ++
Rsa1.0_00796.1_g00007.1 109 LDDGFSWRKYGQKDILGAKFPRGYYRCTYRksqGCEATKQVQRSNENQMLFEISYRGIHSCS 170
59***************************98889*************************997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MKKEIHELMT EGIDYAHQLK SQLGSSSSDL ESREHLAKKI LESYHKSLTI MNHSGELEQV 60 SPHIHGGGSP KSDDSDQEHH QTITSSKKSM PRWTEKVRIT PGVEIDRMLD DGFSWRKYGQ 120 KDILGAKFPR GYYRCTYRKS QGCEATKQVQ RSNENQMLFE ISYRGIHSCS QAANVRSAIP 180 VRVLEPDQTQ GHENLEMVKE SLDTDNHNYN HQPHLHQSMQ YPLSSTPTLE SNNMMLQLRD 240 QNIDFFGSTS FSSDLGANVN YDYLASHNVG SVSHSTSNSP SESPFESFDP NNPFKGFGGF 300 YS
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SUP6}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid (SA). {ECO:0000269|PubMed:22268143}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF430047 | 0.0 | KF430047.1 Brassica rapa WRKY transcription factor 30 (WRKY30) mRNA, complete cds. |