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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00727.1_g00012.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
C2H2 |
Protein Properties |
Length: 235aa MW: 26415.3 Da PI: 7.5671 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00727.1_g00012.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 12.1 | 0.00061 | 80 | 102 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+ C+ C k Fs++ L H++ H
Rsa1.0_00727.1_g00012.1 80 FGCTFCEKEFSTSQALGGHQNAH 102
56******************988 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MELNLTTSCS SSSISSSSHE VGFSTDTKGN MREKIAVGPA SETPRLEFSF LFNRDSIRNS 60 GYGVLDEAEE MKNEAKARVF GCTFCEKEFS TSQALGGHQN AHKQERSMAK RRKVKEMNYP 120 GLSFYSQYPP SGDLFSSSNS SQYGLGVHYN PNIGKSKAYP FNIFRRRLGY REHNVNSHIP 180 LLSHLSCQNT DVFSRNLISN LEGTIHMNKE EQGQKQEQAE TDTCKDTEID LSLKL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC189362 | 0.0 | AC189362.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB045I17, complete sequence. |