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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00710.1_g00014.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
ERF |
Protein Properties |
Length: 287aa MW: 32159.9 Da PI: 5.035 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00710.1_g00014.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56.9 | 5.1e-18 | 93 | 142 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdps+ r+r +lg+f taeeAa +++a+ +l+g
Rsa1.0_00710.1_g00014.1 93 KYRGVRQRP-WGKYAAEIRDPST---RTRLWLGTFATAEEAAIGYDRAAIRLKG 142
8********.**********976...5************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0042991 | Biological Process | transcription factor import into nucleus |
GO:0048825 | Biological Process | cotyledon development |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 287 aa
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to blast |
MRSRERKVKY TVHRKTTPFN GLPKVVRITV TDPFATDSSS DEENDKFVAP TTSVKRYVEE 60 VRFEGAAKRE KTVRKATNKA AAKGDDGTVK PVKYRGVRQR PWGKYAAEIR DPSTRTRLWL 120 GTFATAEEAA IGYDRAAIRL KGPKALTNFL TPPVIDLETV SGSESARESR STSICSPTSV 180 LRFDRNEETE YRTEEPVKLS LTESKDAASS SLSDPLFLSD LFGVGDCLWD SEITTDNLFL 240 DEIQTLPNIT TNTISSEYPE SFPLSVIGDL SSCSWDVDEF FKDQWLD
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Functional Description ? help
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Source |
Description |
UniProt | Component of the cytokinin signaling pathway involved in cotyledons, leaves, and embryos development. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:16832061}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By cytokinins. {ECO:0000269|PubMed:16832061}. |