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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00666.1_g00004.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
CO-like |
Protein Properties |
Length: 402aa MW: 45435.2 Da PI: 5.963 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00666.1_g00004.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 23.8 | 9.1e-08 | 14 | 56 | 3 | 39 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
+r C+ + +k+++++C ++ +lC++C + H+ H++
Rsa1.0_00666.1_g00004.1 14 ARACDSCVKKRARWYCAADDAFLCHSCDGSVHSAnplacrHER 56
578***************************9965777777776 PP
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2 | CCT | 68.5 | 1.8e-23 | 352 | 395 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk++
Rsa1.0_00666.1_g00004.1 352 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRS 395
9*****************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 402 aa
Download sequence Send
to blast |
MMKSLANAVG GKTARACDSC VKKRARWYCA ADDAFLCHSC DGSVHSANPL ACRHERIRLK 60 TASAGKHRGD ASSSPPHPAT WHHGFTRKAR TPRGGKKSHT MVFHDLVPEM SSEDFEVEEQ 120 LIFEVPVLNP MGDEQCFKET KTVFPMMPVC FKSSEEEDDN TESCLNGLFL TEMELAQFSA 180 DVETLLGGGT DREFHAMEEL GLSEILKIEK EEVKEEEEFA TREVCDLDAG NETSPFEISF 240 DYESSHKTAL EEDDEKEDVM KNLVDVGVNE MSGRIKEEKK EKVLMLRLDY ETVISTWGSQ 300 GTPWTVLEPP EIDLDMLCCP TNSMGESGGE AHHHNHFRGL GLHMREAGDG GREARVSRYR 360 EKRRTRLFSK KIRYEVRKLN AEKRPRMKGR FVKRSSIAAA HQ
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 362 | 378 | RRTRLFSKKIRYEVRKL |