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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00582.1_g00018.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 228aa MW: 26296.9 Da PI: 10.0147 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00582.1_g00018.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 101.1 | 6.7e-32 | 149 | 207 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK vk+++fprsYY+Ct +gC+vkk+v+r + d+ vv++tY+g H+h+
Rsa1.0_00582.1_g00018.1 149 LDDGYRWRKYGQKAVKNNPFPRSYYKCTEKGCRVKKQVQRLSGDEGVVVTTYQGVHTHP 207
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006817 | Biological Process | phosphate ion transport |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008134 | Molecular Function | transcription factor binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 228 aa
Download sequence Send
to blast |
MSQTVREMMK PDAHDTDTKP KANFSESELS FLLKLIPELI QHQTLVASTI PSLKHIPAKL 60 SGIKETKVNM KTAYIEVTRR GEQEMEDRSC QVLFPSSSVD HRLSGDQTQI KTSSSLQQHN 120 TNEEKKHKSK KKEREARFAF QTRSQVDILD DGYRWRKYGQ KAVKNNPFPR SYYKCTEKGC 180 RVKKQVQRLS GDEGVVVTTY QGVHTHPVDK PSDNFHHILT QMHIFPPF
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FJ012169 | 0.0 | FJ012169.1 Brassica napus WRKY45 transcription factor (WRKY45) mRNA, complete cds. |