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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Rsa1.0_00566.1_g00002.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
LBD |
Protein Properties |
Length: 207aa MW: 23162.3 Da PI: 4.5182 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00566.1_g00002.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 135.5 | 2e-42 | 32 | 131 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqq 86
+CaaCk+lrr+C ++Cvlapyfp ++p+kf ++h++FGasn++kll++lpe++r+da++slvyeAear+rdPvyG++g i +lq+q
Rsa1.0_00566.1_g00002.1 32 PCAACKILRRRCGEKCVLAPYFPPTEPAKFSIAHRVFGASNIVKLLQELPESQRTDAVKSLVYEAEARIRDPVYGSAGAIYNLQRQ 117
7************************************************************************************* PP
DUF260 87 leqlkaelallkee 100
+++l+aela+++ e
Rsa1.0_00566.1_g00002.1 118 VSELQAELAKAQVE 131
*********99865 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 207 aa
Download sequence Send
to blast |
MLDMESKGDA SAAIIYASPA SSPPPTRVVL SPCAACKILR RRCGEKCVLA PYFPPTEPAK 60 FSIAHRVFGA SNIVKLLQEL PESQRTDAVK SLVYEAEARI RDPVYGSAGA IYNLQRQVSE 120 LQAELAKAQV EIVSMQFQRS NLLELIQNMD QRNQEQQNMM AFESSLGNCE HDEFISSSDE 180 ESNDFGFLED KYFNTNSLML WCDPLLI
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