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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00516.1_g00016.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
M-type_MADS |
Protein Properties |
Length: 290aa MW: 32747.8 Da PI: 5.3855 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00516.1_g00016.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 63.2 | 2.8e-20 | 14 | 62 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
+++++s + +++ R+ +i+KKA+EL +LCd+e++vi ++++g+l++++
Rsa1.0_00516.1_g00016.1 14 PSSSYSLAATSLNSRLLTIFKKAQELTTLCDIEACVIHYGPDGELRTWP 62
689*********************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MRPPLSSSFS NSSPSSSYSL AATSLNSRLL TIFKKAQELT TLCDIEACVI HYGPDGELRT 60 WPENRDKVRD LALRYIQLDE AKRRKKSLNL YEFLNKNKKT TTMANNFKKK NVEELKYPIS 120 DHYSLDQINQ IIQSLELSYS TLQERRRFLA AKANLEDRQH LGTQSSNPSQ FTELLIGNMC 180 MGNNFQDPCV SSNTQDYSVF PLELQESVSN YGLNQLMQHE LYVFDQNMCM GDTTNINNAQ 240 DPCLSNLVSD DFCFGLQDPY GGKSGNPSFS QGFPDMLSSC VCQASTLPSL
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |