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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00427.1_g00007.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
bZIP |
Protein Properties |
Length: 472aa MW: 51005.9 Da PI: 8.7968 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00427.1_g00007.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 38.5 | 2.5e-12 | 338 | 396 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
kr +r NR++A rs +RK ++++eLe kv++L++e ++L +l +l+ + l++++
Rsa1.0_00427.1_g00007.1 338 KRVKRILANRVSAARSKERKTQYMAELEHKVQTLQTEATTLSAQLTHLQRDSMGLTNQN 396
899*********************************************99888777766 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0010628 | Biological Process | positive regulation of gene expression |
GO:0010629 | Biological Process | negative regulation of gene expression |
GO:0090567 | Biological Process | reproductive shoot system development |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 472 aa
Download sequence Send
to blast |
MGGGSGTDTT SMTQRPSSIP KQQPPLIPNH HLNPPPPPLI RSSSPQPFTA GTPPPIPPYS 60 QIPATLQLKH SRSTSQPSSF FSFDSLPPLN PSPLPVSSAE ERNGAGFSPS LPPSPFTMCH 120 STSRIIGDGP ENLPPRKSHR RSNSDVTFGF ISSSLKSPPL IPSSRSLERS VSGGGGEGAC 180 ASDWSNLVKE EPGRRSESEA MDDIFKAYMN LDNIDVLNSF GGEEMESSGT RKTASSDSEG 240 ESSAACGNNV KVSSGVKRRA GGDIAPPTSR HYRSVSMDSG FMGKLDFGGG GDDNKLPLTS 300 SGEGNSSFEF GNGEFTAAEM KKISADEKLA EIVMSDPKRV KRILANRVSA ARSKERKTQY 360 MAELEHKVQT LQTEATTLSA QLTHLQRDSM GLTNQNSELK FRLQAMEQQA QLRDALSEKL 420 TEEVQRLKLV IGETSSRSRR ESNISKTALS PEMFQQLSIS QQQMQHSKAQ IK
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 350 | 358 | ARSKERKTQ |