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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00407.1_g00022.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 343aa MW: 38805.1 Da PI: 10.559 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00407.1_g00022.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 98.3 | 5e-31 | 277 | 335 | 3 | 60 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60
D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ edp ++++tYe eHnh+k
Rsa1.0_00407.1_g00022.1 277 DDYSWRKYGQKPIKGSPYPRGYYKCSSMrGCPARKHVERCVEDPAMLIVTYEAEHNHPK 335
99***********************9988****************************85 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 343 aa
Download sequence Send
to blast |
MEEIEGTNRA AVESCHRVLN LLSRPPHQQD QVSLVSETRE AVSRFKRVGS LLSKSVGHAR 60 FRRANNKKPL THLSQQTIFL DPCRLQRTQL PESSSQKLRS GFHDLSLRPA DSLTLGTRSF 120 SLKPPPLLQL NHQAMPSSTT MFPEHQQQQL HERLQAHHLH QQQQQQQRHH QAEIMLRKCN 180 GGGISLSFDN SSCTPTMSST RSFVSSLSID GSVANAEGRN SFQLIGDQSL PHSKRKCLLK 240 GDEHGSRCHC SKKRKHRVRR SIRVPAISNK VADIPPDDYS WRKYGQKPIK GSPYPRGYYK 300 CSSMRGCPAR KHVERCVEDP AMLIVTYEAE HNHPKLPSQA VTT
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 233 | 254 | KRKCLLKGDEHGSRCHCSKKRK |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}. |