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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00382.1_g00027.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
GATA |
Protein Properties |
Length: 451aa MW: 50627.9 Da PI: 6.3585 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00382.1_g00027.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 37.3 | 3.9e-12 | 4 | 32 | 7 | 35 |
GATA 7 tkTplWRrgpdgnktLCnaCGlyyrkkgl 35
t TplWR+gp ++ LCnaCG ++r kg+
Rsa1.0_00382.1_g00027.1 4 TGTPLWRNGPPEKPVLCNACGSRWRTKGS 32
67********88888***********997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 451 aa
Download sequence Send
to blast |
MLLTGTPLWR NGPPEKPVLC NACGSRWRTK GSLVNYTPLH SRADDINDHR APRMMLINGM 60 PLNKKTPKRK PYQENFTVKR TNNGLKKRAL DELEASNRSS SGSVVSNSES CDQSNAWETT 120 FPCKKRTCVL GRPKAASSVE KLTKDLYSIL QEQQSSCLSG TSEEDLLYEN ESPMVIGHGS 180 VLLRDPHEET EASSLLVDSS RSSSIRSAEF VVKRGQRSLN FGCRTKSQVS GRHGLPLCNI 240 DLKDVFNYDE FIENFTKEEQ QKLMKLLPQV DSVDLPDSVR SMFECSQFRE NFSLFQQLVA 300 DGVFETCSPS FSSSGSDFKT LAKLALSDPN KSHLLETYHM LKEQRKGIED SVTKPSDNHS 360 LVTIERPCES LNQNFLETRA VMKSPKEVMK ISSKHMETNE TIENSVSSFN QMSYGGSMAF 420 SYEDNDISDQ DLLLDVPSNG SYPQAELLHM I
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC189261 | 0.0 | AC189261.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB021P11, complete sequence. |