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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00351.1_g00011.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 329aa MW: 37415.9 Da PI: 8.3102 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00351.1_g00011.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 95.1 | 5e-30 | 113 | 169 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58
dDgy+WrKYGqK++k s++prsY++Ct + C++kk+vers +dp++ +itYeg H h
Rsa1.0_00351.1_g00011.1 113 DDGYKWRKYGQKSIKHSPNPRSYFKCTNSICNAKKQVERSIDDPNTYIITYEGFHLH 169
8******************************************************99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MAEEEDSGWK TSYGSHALDE LFVNEPHLLF LPQEQHLRLM PKENSIINKL VSSNFDSGPR 60 LQDIANAVAM VEPLTHPVRQ ISESTVPILR RRTLSKVDRY TLKVKNNSNG MSDDGYKWRK 120 YGQKSIKHSP NPRSYFKCTN SICNAKKQVE RSIDDPNTYI ITYEGFHLHF TYPFFLSDST 180 HRSNKKPKLK NEAQNKAHFE INPKSQAQEK NKQIKLVKSD YQNCMAYEAD GNTPANLEDG 240 FFPPLIQGWQ QQGLLEDVVA TAIKNIPTND GGLAASRSSL PSYTSSTCSF SRTDSPPLSP 300 SFFKLDSQFF HSGFSDERVQ SDLENFKHL
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |