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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00324.1_g00023.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
bZIP |
Protein Properties |
Length: 374aa MW: 41095.6 Da PI: 6.2759 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00324.1_g00023.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 45.7 | 1.4e-14 | 232 | 285 | 3 | 59 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59
++kr+rr+ +NRe+ArrsR+RK++++ e + v +L +e ++L +l+++ +k
Rsa1.0_00324.1_g00023.1 232 DVKRARRMLSNRESARRSRRRKQEQMNEFDTQVNQLRTEHSTLL---GRLTDMNQKY 285
68*****************************************9...5555555543 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:2000693 | Biological Process | positive regulation of seed maturation |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 374 aa
Download sequence Send
to blast |
MHIVFSVDDL TDSFWPPPPP EPSPSQQQNM PPDGMTRSQS EWAFQRLLRE MSASDESPTT 60 ISVRSPPPPV HSEQSLSTVD ETADVVEIQK PPPPRNPAVD DRNRARSSSD PLVSDCVDPN 120 QFRAILQSKL EIACAAVARR VGAVKPEDSS ASGVNQKLSP PPVGSQAQGS VVVAQTSPGA 180 SSVRSVPSTS VKKKPDVVVP ARQTTSISSR DDSDDDDLDG DTETADNGDP TDVKRARRML 240 SNRESARRSR RRKQEQMNEF DTQVNQLRTE HSTLLGRLTD MNQKYDAAAV DNRILRADIE 300 TLRTKVKMAE ETVKRVTGVN PLQWAGPNMG MPVNNTPRIP STTGAGLAPN QRVEVNREGT 360 PNLYEPMPHW NHKH
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 246 | 253 | RRSRRRKQ |
2 | 248 | 253 | SRRRKQ |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds to the 5'-ACGT-3' box, especially present in G-box-like motif (5'-CCACGTGGCC-3'), ABRE elements, of seed storage protein (SSP) encoding gene promoters (e.g. At2S and CRU3) and promotes their expression in seeds when in complex with ABI3 and BZIP53. {ECO:0000269|PubMed:12657652, ECO:0000269|PubMed:19261733, ECO:0000269|PubMed:19531597}. |
Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] - Jain P, et al.
A-ZIP53, a dominant negative reveals the molecular mechanism of heterodimerization between bZIP53, bZIP10 and bZIP25 involved in Arabidopsis seed maturation. Sci Rep, 2017. 7(1): p. 14343 [PMID:29084982] - Pedrotti L, et al.
Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness. Plant Cell, 2018. 30(2): p. 495-509 [PMID:29348240]
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