|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Rsa1.0_00313.1_g00007.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
Family |
WRKY |
Protein Properties |
Length: 260aa MW: 29285.9 Da PI: 5.1761 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00313.1_g00007.1 | genome | RGD | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 59.6 | 5.9e-19 | 143 | 199 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
dD ++WrKYGqKe+ g +fpr Ct++ +Cp+kk+v+r +edp ++ +tY+++H+++
Rsa1.0_00313.1_g00007.1 143 DDNHTWRKYGQKEILGFKFPR----CTHEklyKCPAKKQVQRLDEDPYTFCVTYRSSHTCH 199
8*******************6....**999999*************************996 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 260 aa
Download sequence Send
to blast |
MEEIMSMIFN GINLVKELEF SLSAQESPES LSTSLGSVST LFGDANERLK ILLARRNSLV 60 LNQPEPKPVS MSDLDQIMMQ QIEHGLMQDY SLREGVMQGV KNIDSGPGCS FSTPRPRRRQ 120 KDVEEEKVFV AAARMGNMDT PPDDNHTWRK YGQKEILGFK FPRCTHEKLY KCPAKKQVQR 180 LDEDPYTFCV TYRSSHTCHF FTTSPISSTA ATATTDGHYG STVVNMAEAL FGNVDSVVPF 240 DESYFDYRSL FNGSGSDWDT
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Publications
? help Back to Top |
- Ramírez V,López A,Mauch-Mani B,Gil MJ,Vera P
An extracellular subtilase switch for immune priming in Arabidopsis. PLoS Pathog., 2013. 9(6): p. e1003445 [PMID:23818851] - Ramírez V,López A,Mauch-Mani B,Gil MJ,Vera P
Correction: An Extracellular Subtilase Switch for Immune Priming in Arabidopsis. PLoS Pathog., 2016. 12(11): p. e1006003 [PMID:27806116]
|