PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_00222.1_g00001.1
Organism
Raphanus sativus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 660aa    MW: 71357.3 Da    PI: 6.176
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_00222.1_g00001.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.36.8e-13171231262
                              XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                               e k+  r+ +NRe+A+ sRqRKk ++eeLeekv  + +  ++L  ++     e a+l+++
  Rsa1.0_00222.1_g00001.1 171 DEKKKKARLVRNRESAQLSRQRKKHYVEELEEKVRHMHSTITDLNGKIYFFMAENAALRQQ 231
                              678999********************************99999999999888888888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-13169234IPR004827Basic-leucine zipper domain
PfamPF001702.4E-10171231IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.576172232IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.5E-16174232No hitNo description
SuperFamilySSF579591.05E-11174232No hitNo description
CDDcd147046.50E-20175226No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 660 aa     Download sequence    Send to blast
MSQSLTEEPP PSGFDDQFHR PGSDQTPIGE LMSDLGFPID GDFELTFDGM DDLYLPAENE  60
TFLIPEQFGD FTPESESSGD CDCLPKDADK STPLSSQGSG NCGGSDVSDV VVDQKVKVEE  120
DAATATTTTS VTKRKKEEIE EDMSDESRNS KYRRSGEEEV GDASAVTGEE DEKKKKARLV  180
RNRESAQLSR QRKKHYVEEL EEKVRHMHST ITDLNGKIYF FMAENAALRQ QLGGSGMMCP  240
PPPPPPPPMG MYPPMGYQWM PCPPPYMLKQ QGSQVPLVPI PRLKPQSALG SSKGKSKKSE  300
TKTKKVASIS FLGLLFCLFL FGALAPVMNV SYGGISGAFY GNYRSNYVTD QIYSHRRSRV  360
LETSGSGAGS GGFNGNGMHC GRDSNISATE SSVPPGNGSE PLVASLFVPR NDKLVKIDGN  420
LIINSILASE KAVVASRKAS ESNERKADPL ISKDYPPALP LPGVGKIEDM AKHLYRSKAE  480
KQKALSSGSD DTLKEKIKTK AASGEMQQWF REGVAGPMFS SGMCTEVFQF DVSSTSGAII  540
PASPAANVSS EHSNNATDTH MRKNRRTLRG LAIPLPGSDF NFTKEHQRNS SSKEIKPASS  600
MVVSVLVDPR EGGDGGDIDG MIGGPKSLSR VFVVVLVDSA KYVTYSCVLP RSGAPHLVTT
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in salt and osmotic stress responses. Functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Functions as a stress sensor and transducer in ER stress signaling pathway. ER stress induces proteolysis of BZIP17 by SBT6.1 (S1P) and S2P, and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as protein involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269|PubMed:17662035, ECO:0000269|PubMed:20876872}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapRsa1.0_00222.1_g00001.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018439934.10.0PREDICTED: bZIP transcription factor 17-like
SwissprotO222080.0BZP17_ARATH; bZIP transcription factor 17
TrEMBLA0A0D3BP020.0A0A0D3BP02_BRAOL; Uncharacterized protein
STRINGBo4g012880.10.0(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM88812737
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.10.0bZIP family protein
Publications ? help Back to Top
  1. Zhou SF, et al.
    Membrane-associated transcription factor peptidase, site-2 protease, antagonizes ABA signaling in Arabidopsis.
    New Phytol., 2015. 208(1): p. 188-97
    [PMID:25919792]
  2. Sagor GH, et al.
    The polyamine spermine induces the unfolded protein response via the MAPK cascade in Arabidopsis.
    Front Plant Sci, 2015. 6: p. 687
    [PMID:26442007]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Kim JS,Yamaguchi-Shinozaki K,Shinozaki K
    ER-Anchored Transcription Factors bZIP17 and bZIP28 Regulate Root Elongation.
    Plant Physiol., 2018. 176(3): p. 2221-2230
    [PMID:29367234]
  5. Cifuentes-Esquivel N, et al.
    bZIP17 regulates the expression of genes related to seed storage and germination, reducing seed susceptibility to osmotic stress.
    J. Cell. Biochem., 2018. 119(8): p. 6857-6868
    [PMID:29693271]
  6. Guan P, et al.
    SENSITIVE TO SALT1, An Endoplasmic Reticulum-Localized Chaperone, Positively Regulates Salt Resistance.
    Plant Physiol., 2018. 178(3): p. 1390-1405
    [PMID:30287478]