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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00211.1_g00012.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 233aa MW: 26165.2 Da PI: 10.3167 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00211.1_g00012.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 33.2 | 1e-10 | 212 | 233 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS
WRKY 1 ldDgynWrKYGqKevkgsefpr 22
ldDgy+WrKYGqK+vk++++pr
Rsa1.0_00211.1_g00012.1 212 LDDGYRWRKYGQKVVKNTQHPR 233
59*******************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 233 aa
Download sequence Send
to blast |
MGTINQGISL FDEPQNIINP NNTNHLGLFF SFPNQTLSSS SSSSSSSPSS LVSPFQSHHS 60 LDSFLHHNSS SFVIHPQDPI NLTANLPETL ISISSLSSPK QRDFHDGIVN LDHRRLTGGI 120 SSQRPSLDPW AWSSQARYGY SKKNNHVSET DDGVGEGGGI NNHQHHETPP RHKHTMKLLG 180 VVPTPKMKKL KTRRKVREPR FCFKTLSDVD VLDDGYRWRK YGQKVVKNTQ HPR
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF430035 | 0.0 | KF430035.1 Brassica rapa WRKY transcription factor 13 (WRKY13) mRNA, complete cds. |