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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00201.1_g00019.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
bZIP |
Protein Properties |
Length: 377aa MW: 40676.1 Da PI: 9.7126 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00201.1_g00019.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 73.7 | 2.5e-23 | 259 | 320 | 1 | 62 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L+aeN+aL++el++l+++++kl+
Rsa1.0_00201.1_g00019.1 259 ERELKRERRKQSNRESARRSRLRKQAETEELARKVEALTAENMALRSELNQLSEKSDKLRGA 320
89*******************************************************99865 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0005829 | Cellular Component | cytosol |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 377 aa
Download sequence Send
to blast |
MGKSEEQPPK VTKSDNIPSS PADQTNVHVY PDWAAMQAYY GPRVAMPPYY NSAMAASGHP 60 PPPPYMWNPQ HMMSPYGTPY ATVYPHGGGV YAHPGFPMGT QPQGQKGVPL TTPGTPLSID 120 TPSKSTGNTE NGLMKKLKEF DGLAMSLGNG TNGDEGKRSR NSSETEGSTD GSDGNTTGAD 180 EPKLKRSREG TPTKDEKKHL VQSSSLRSVS QSSGDNCVKP NVEGGGAIVS AAGVSANSNP 240 TFMSQSLAMV PPETWLQNER ELKRERRKQS NRESARRSRL RKQAETEELA RKVEALTAEN 300 MALRSELNQL SEKSDKLRGA NATLLDKLKS AEPEKRVKNS GNGDNKNKNQ GESESNSTGK 360 LHQLLDTKPR ADGVAAR
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 275 | 281 | RRSRLRK |
2 | 275 | 282 | RRSRLRKQ |
Functional Description ? help
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Source |
Description |
UniProt | Binds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8672884}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BNU27108 | 0.0 | U27108.1 Brassica napus transcription factor (BnGBF1) mRNA, partial cds. |