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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Rsa1.0_00179.1_g00067.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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| Family |
ERF |
| Protein Properties |
Length: 346aa MW: 39084.9 Da PI: 4.5063 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Rsa1.0_00179.1_g00067.1 | genome | RGD | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 57 | 4.7e-18 | 69 | 119 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr++ +g+WvAeIr+p + r r +lg+f taeeAa a+++a++ ++g
Rsa1.0_00179.1_g00067.1 69 CRFRGVRQRV-WGKWVAEIREP---N-RvSRLWLGTFPTAEEAACAYDEAARVMYG 119
689*****99.**********8...2.58**********************99887 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 346 aa
Download sequence Send
to blast |
MSVYEQTGTV TSSKKRKSRS RADGKTVADR LKQWKDSNGG ENQQRRIVHA KGSKKGCMRG 60
KGGPENTNCR FRGVRQRVWG KWVAEIREPN RVSRLWLGTF PTAEEAACAY DEAARVMYGP 120
LARLNFPGSV GSEFTSTSSQ SEVCTVEDKV VIGVDVCVKR EDTDCESKPV SQIVDVKQSY 180
GDSRLQDSSV VEHRDVVNSR LSSYLLDEFE QDYQSRLTKE LEKPKEEEEV IQPQQEPEPE 240
LTVADYGWTI DMQNEQGFWD QDDLFDVDEL LGDLDVDLLP GSDPSQNQNQ EQVHPGGNDS 300
HPFMLEPHND PCQNQSQVQP SGDYSHPLEL EPHNGHEFFD LGFLDL
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. {ECO:0000269|PubMed:11798174}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By high-salt and drought stresses. {ECO:0000269|PubMed:10809011, ECO:0000269|PubMed:9707537}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC189431 | 0.0 | AC189431.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB068B07, complete sequence. |
| Publications
? help Back to Top |
- Djafi N, et al.
The Arabidopsis DREB2 genetic pathway is constitutively repressed by basal phosphoinositide-dependent phospholipase C coupled to diacylglycerol kinase.
Front Plant Sci, 2013. 4: p. 307
[PMID:23964284] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Kim K, et al.
Alleviation of salt stress by enterobacter sp. EJ01 in tomato and Arabidopsis is accompanied by up-regulation of conserved salinity responsive factors in plants.
Mol. Cells, 2014. 37(2): p. 109-17
[PMID:24598995] - Miyazaki Y,Abe H,Takase T,Kobayashi M,Kiyosue T
Overexpression of LOV KELCH protein 2 confers dehydration tolerance and is associated with enhanced expression of dehydration-inducible genes in Arabidopsis thaliana.
Plant Cell Rep., 2015. 34(5): p. 843-52
[PMID:25627253] - Lee SY,Boon NJ,Webb AA,Tanaka RJ
Synergistic Activation of RD29A Via Integration of Salinity Stress and Abscisic Acid in Arabidopsis thaliana.
Plant Cell Physiol., 2016. 57(10): p. 2147-2160
[PMID:27497445]
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