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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00166.1_g00008.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
MYB_related |
Protein Properties |
Length: 309aa MW: 34171.8 Da PI: 9.7823 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00166.1_g00008.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 42.8 | 1.2e-13 | 101 | 146 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++WT++E+ ++ + k+lG+g+W+ Ia+ + ++Rt+ q+ s+ qky
Rsa1.0_00166.1_g00008.1 101 KPWTEDEHRMFLVGLKKLGKGDWRGIAKSFVTTRTPTQVASHAQKY 146
58*******************************************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MMTTAKTCSH CGNNVHDARP CCLNSVNKGS VKLFGVDISS DPIKSPEVTA LRKCLSLGNL 60 DSLLDNGNGD LIAAVEDTGY HSDGQIHSKR GRSSHEKKKG KPWTEDEHRM FLVGLKKLGK 120 GDWRGIAKSF VTTRTPTQVA SHAQKYFLRL NGNDKRKRRA SLFDISLEDQ KGKEKNSPDA 180 STSSSKTPSK QPITGSQEPV QVQTPTEVSN RFQNLSMGYM PTYQNVPPYY NFSPFMFHPM 240 YYANLVPIRY DHPSGIPVPR HVPISMPQPH LDKVSDMTKK EGLELDIGLP PPKSTGATDL 300 TANGIIHVK
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |