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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00152.1_g00023.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
G2-like |
Protein Properties |
Length: 288aa MW: 31135.5 Da PI: 5.8461 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00152.1_g00023.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 105.5 | 3.1e-33 | 15 | 69 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+rlrWt+eLHerFv+ v+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
Rsa1.0_00152.1_g00023.1 15 KQRLRWTHELHERFVDSVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 69
79****************************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MEADNGGNNS SHASKQRLRW THELHERFVD SVAQLGGPDR ATPKGVLRVM GVQGLTIYHV 60 KSHLQKYRLA KYLPDSSSEG KKTDKKESGD VLSGLDGSSG MQITEALKLQ MEVQKRLHEQ 120 LEVQRQLQLR IEAQGKYLKK IIEEQQRLSG ALGEPSGPVP GESDPATPAP TSESPLQDKS 180 GKECGPDKSL SVDESLSSYR EPLTPDSGCN VGSQDESAGE ERSSKRPRLV RGGAAGYTPD 240 EMVVAHPILE SGLNASYHQS DHALGFDRPS TSLLGAENGL DKVSGDDL
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4r_A | 3e-23 | 15 | 72 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 3e-23 | 15 | 72 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 3e-23 | 15 | 72 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 3e-23 | 15 | 72 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AY084725 | 0.0 | AY084725.1 Arabidopsis thaliana clone 115924 mRNA, complete sequence. |