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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Rsa1.0_00135.1_g00028.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
| Family |
NAC |
| Protein Properties |
Length: 314aa MW: 35235.1 Da PI: 5.4143 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Rsa1.0_00135.1_g00028.1 | genome | RGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 163.7 | 6.5e-51 | 14 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86
lppGfrF Ptdeel+v+yL++k++g +++l + i+e+d+yk++Pw Lp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWkat
Rsa1.0_00135.1_g00028.1 14 LPPGFRFYPTDEELMVQYLCRKAAGYDFSL-QLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKAT 98
79***************************9.89***************8888899******************************* PP
NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
g+dk + + +g+ vg+kk Lvfy g+apkg+kt+W+mheyrl
Rsa1.0_00135.1_g00028.1 99 GTDKIIST-EGKRVGIKKALVFYIGKAPKGTKTNWIMHEYRL 139
**999988.9999***************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MGIEETDPLA QLSLPPGFRF YPTDEELMVQ YLCRKAAGYD FSLQLIAEID LYKFDPWVLP 60
NKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIISTEGKR VGIKKALVFY 120
IGKAPKGTKT NWIMHEYRLL EPSHRDGSSK LDDWVLCRIY KKQSSAQKQA YENVITSTRE 180
LSNNGTSSTT SSSSHFEDVL DSLHHETDNR NFQYANPNQF SSLRPDLTGD KTGINGLSDT 240
SSFDWGSFVG NVEHNSGPEP GLSHVVPSIE FNSGYLKMEE EFNNPDDFGF AQNGYGIDSV 300
GFGYPGQVGG FGFI
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 3swm_A | 1e-120 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 1e-120 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 1e-120 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 1e-120 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 1e-120 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 1e-120 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 1e-120 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 1e-120 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factors that bind specifically to the 5'-CATGTG-3' motif. {ECO:0000269|PubMed:15319476}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by drought, high salinity and abscisic acid (ABA). Slightly up-regulated by jasmonic acid. Not induced by cold treatment. {ECO:0000269|PubMed:12646039, ECO:0000269|PubMed:15319476}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KC966747 | 0.0 | KC966747.1 Brassica napus NAC transcription factor 19 (NAC19.1) mRNA, complete cds. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Zheng XY, et al.
Coronatine promotes Pseudomonas syringae virulence in plants by activating a signaling cascade that inhibits salicylic acid accumulation.
Cell Host Microbe, 2012. 11(6): p. 587-96
[PMID:22704619] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Guan Q,Yue X,Zeng H,Zhu J
The protein phosphatase RCF2 and its interacting partner NAC019 are critical for heat stress-responsive gene regulation and thermotolerance in Arabidopsis.
Plant Cell, 2014. 26(1): p. 438-53
[PMID:24415771] - Chen F, et al.
Arabidopsis Phytochrome A Directly Targets Numerous Promoters for Individualized Modulation of Genes in a Wide Range of Pathways.
Plant Cell, 2014. 26(5): p. 1949-1966
[PMID:24794133] - Wang T, et al.
Salt-Related MYB1 Coordinates Abscisic Acid Biosynthesis and Signaling during Salt Stress in Arabidopsis.
Plant Physiol., 2015. 169(2): p. 1027-41
[PMID:26243618] - Zhu X, et al.
Jasmonic acid promotes degreening via MYC2/3/4- and ANAC019/055/072-mediated regulation of major chlorophyll catabolic genes.
Plant J., 2015. 84(3): p. 597-610
[PMID:26407000] - Takasaki H, et al.
SNAC-As, stress-responsive NAC transcription factors, mediate ABA-inducible leaf senescence.
Plant J., 2015. 84(6): p. 1114-23
[PMID:26518251] - Gimenez-Ibanez S, et al.
JAZ2 controls stomata dynamics during bacterial invasion.
New Phytol., 2017. 213(3): p. 1378-1392
[PMID:28005270] - Ueda M, et al.
The Distinct Roles of Class I and II RPD3-Like Histone Deacetylases in Salinity Stress Response.
Plant Physiol., 2017. 175(4): p. 1760-1773
[PMID:29018096] - Kang M, et al.
The C-Domain of the NAC Transcription Factor ANAC019 Is Necessary for pH-Tuned DNA Binding through a Histidine Switch in the N-Domain.
Cell Rep, 2018. 22(5): p. 1141-1150
[PMID:29386103] - Sukiran NL,Ma JC,Ma H,Su Z
ANAC019 is required for recovery of reproductive development under drought stress in Arabidopsis.
Plant Mol. Biol., 2019. 99(1-2): p. 161-174
[PMID:30604322]
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