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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00131.1_g00058.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
S1Fa-like |
Protein Properties |
Length: 70aa MW: 7761.56 Da PI: 11.1191 |
Description |
S1Fa-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00131.1_g00058.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | S1FA | 135.5 | 1.3e-42 | 2 | 70 | 2 | 70 |
S1FA 2 avakveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
+++k+e+kGlnPGliv+lv+ggll++flvgn++ly+yaqknlPPrkkkP+skkk+k+eklk+Gv+vPGe
Rsa1.0_00131.1_g00058.1 2 KQGKIESKGLNPGLIVILVIGGLLVTFLVGNFVLYTYAQKNLPPRKKKPLSKKKMKKEKLKKGVQVPGE 70
5789****************************************************************8 PP
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Functional Description ? help
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Source |
Description |
UniProt | DNA-binding protein that specifically recognizes a negative element (S1F) within the RPS1 promoter. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC016661 | 3e-58 | AC016661.7 Arabidopsis thaliana chromosome 3 BAC F11F8 genomic sequence, complete sequence. |
GenBank | CP002686 | 3e-58 | CP002686.1 Arabidopsis thaliana chromosome 3, complete sequence. |