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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00119.1_g00057.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 313aa MW: 35156.4 Da PI: 6.5188 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00119.1_g00057.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 108.1 | 4.4e-34 | 166 | 223 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers +dp+vv++tYeg+Hnh+
Rsa1.0_00119.1_g00057.1 166 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQRCNVKKRVERSFQDPTVVITTYEGQHNHP 223
8********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 313 aa
Download sequence Send
to blast |
MTNETKDFYN YQYPSSFSLY EMMNLPTSTP SSYGNNGFDP SSYSFTDCIQ SSPVAYDSLL 60 QKSFGLSPSS SEVFNSSIDQ ESKRDVVTNE VTGETPTRVS APSSSSEADH PGEDSGKSQR 120 KRELAEDGGE ENQSSKKVGK AKKNEEKKQR EPRVSFMTKS EVDHLEDGYR WRKYGQKAVK 180 NSPYPRSYYR CTTQRCNVKK RVERSFQDPT VVITTYEGQH NHPIPTNLRG SSAAAAMYSD 240 FIMTPRSFTH DMFGTAAYTS NGSVEGALDY GYGQRGYGSV NANPNASHQE YHQGGEYELL 300 KEILPSIFFK QEH
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF430045 | 0.0 | KF430045.1 Brassica rapa WRKY transcription factor 28 (WRKY28) mRNA, complete cds. |