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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00098.1_g00018.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 206aa MW: 23336.4 Da PI: 5.1175 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00098.1_g00018.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 88.1 | 7.8e-28 | 113 | 171 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+dDgy+WrKYG+K+vk++++ r+YY+C+ +gC+vkk+ver+ ed +v++tYeg Hnhe
Rsa1.0_00098.1_g00018.1 113 MDDGYKWRKYGKKSVKNNTNKRNYYKCSNEGCTVKKRVERDGEDAAYVITTYEGVHNHE 171
59********************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
GO:0042742 | Biological Process | defense response to bacterium |
GO:0050832 | Biological Process | defense response to fungus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 206 aa
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to blast |
MNISQNPSPN FPFFSDENFI NPFMDNFDFT DLIFDVGEGG NNNEFIQEET SSPISIVSSE 60 TFTGESGGSG SGITTLSKKE STFDCKSRGS KDGETKETGN RVAFRTRSKI DVMDDGYKWR 120 KYGKKSVKNN TNKRNYYKCS NEGCTVKKRV ERDGEDAAYV ITTYEGVHNH ESPSHVYYSD 180 MVLSYDHDNW NQHSLLQAIQ QISPSY
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Involved in defense responses. May act as positive regulator of salicylic acid (SA)-mediated signaling and negative regulator of jasmonic acid (JA)-mediated signaling (PubMed:21030507). {ECO:0000250, ECO:0000269|PubMed:21030507}. |