 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Rsa1.0_00073.1_g00007.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
Family |
ERF |
Protein Properties |
Length: 272aa MW: 31176.3 Da PI: 7.1313 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00073.1_g00007.1 | genome | RGD | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.8 | 6.4e-19 | 103 | 152 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+ Vr+++ +g+WvAeIr p++ r+r +lg+f t+eeAa a+++a+++++ge
Rsa1.0_00073.1_g00007.1 103 YRCVRQRH-WGKWVAEIRLPKT---RTRLWLGTFETEEEAALAYDQAARRIRGE 152
9******9.**********965...4**************************97 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MEIALNMNGC KEEFMQALEP FMKVTSSSSF PSSSKQEPLT PNNQTGPIGL NQLTPTQILQ 60 IQRELHLRQN QARRRGSAHN LHLLNAKPTL MKKTDVSKPV KLYRCVRQRH WGKWVAEIRL 120 PKTRTRLWLG TFETEEEAAL AYDQAARRIR GENARLNFPN NGEYKQTLSP TVNAKIESIF 180 NTSDLPLHEL KKPAKTEEEF FGFHYTGPTP DREREFSDMF GYGFGSSLES DITLLDLSSE 240 WVKEDESFCM GLQKYPSFEI DWDAIDKLSG SV
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |