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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00045.1_g00051.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 382aa MW: 42568.7 Da PI: 6.8939 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00045.1_g00051.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 104.5 | 5.5e-33 | 206 | 264 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK vk+s++prsYYrCt+ gC vkk+vers++dp +v +tYeg+H+h+
Rsa1.0_00045.1_g00051.1 206 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSSDDPYIVMTTYEGQHTHP 264
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 382 aa
Download sequence Send
to blast |
MEQLNSTKNT ETKIQHQEDQ QQQMFQATTS SHMANLDTSS DHHHQLELAG NNINLASIFD 60 APVSSPFPYS YLEDPDPFLD FLPQDHHQFS SSSNSSSFSF DAFPLQNNNT NLFNTDLPLS 120 QPSTKKRASS EVVNIAPTSP SSNSVSSSSK EVANDNIDKD ATLKDPEEGE QEQKGTKPQL 180 KAKKKNQKKA REARVAFLTR SDIDNLDDGY RWRKYGQKAV KNSPYPRSYY RCTTVGCGVK 240 KRVERSSDDP YIVMTTYEGQ HTHPFPMTRG HIAMLTSPIL DHGATATSSS SFAIPPRYLL 300 TQHHQPYSSM YSNSLSMINR SSSDGTFVNP GSSSFPGFGY DMSQASTSTT SAIRDHGLLQ 360 DILPSQIRSD TTNTRTNQED KK
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF430080 | 0.0 | KF430080.1 Brassica rapa WRKY transcription factor 75 (WRKY75) mRNA, complete cds. |