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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00045.1_g00032.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
G2-like |
Protein Properties |
Length: 429aa MW: 48068.2 Da PI: 5.8532 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00045.1_g00032.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 104 | 9.3e-33 | 247 | 301 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r+rWtpeLHe+Fveav+qLGGse+AtPk++l+l+k +gLt++hvkSHLQkYR+
Rsa1.0_00045.1_g00032.1 247 KQRMRWTPELHEAFVEAVNQLGGSERATPKAVLKLLKNPGLTIYHVKSHLQKYRT 301
79****************************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 429 aa
Download sequence Send
to blast |
MAMANDFGYS TAMSSSFSAL HATVEDRYHK FPNSFWGSSG EELMNNHVPY QVVNSGGVYL 60 SGFCNVSAVS THGRTSQTQP PVSTMPSDRS SMQQPPVFTM PSDRSSMQDC QQSSSLINHH 120 PQEFLDPLDE LFDFSDHVSA PNPQAESSGV VKVVDLHEKS EWQNWADQLM SVDNGSEPNW 180 SELLGDPSPH NQNSQAQFHQ RSQQIPTPSP DVQRQEIIAN QQQQHQVVSL EEQLSARNSS 240 ASAATSKQRM RWTPELHEAF VEAVNQLGGS ERATPKAVLK LLKNPGLTIY HVKSHLQKYR 300 TARYKPETSE ATGEPQEKKI TSIEDIKSLD MKTSVEITQA LRLQMEVQKR LHEQLEIQRS 360 LQLQIEKQGR YLQMMFEKQQ QLQENNGSSS EPSPKQCNGT SAEVDFGLVA QAVNQTESAL 420 ASRKRARDD
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4k_A | 1e-28 | 247 | 305 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 1e-28 | 247 | 305 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 1e-28 | 247 | 305 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 1e-28 | 247 | 305 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 1e-28 | 247 | 305 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 1e-28 | 247 | 305 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 1e-28 | 247 | 305 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 1e-28 | 247 | 305 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor acting as central integrator of phosphate starvation responses (PubMed:20838596). Regulates FER1 expression upon phosphate starvation, linking iron and phosphate homeostasis (PubMed:23788639). {ECO:0000269|PubMed:20838596, ECO:0000269|PubMed:23788639}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Not up-regulated by Pi starvation. {ECO:0000269|PubMed:26586833}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK352794 | 0.0 | AK352794.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-05-N05. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Bonnot C, et al.
A chemical genetic strategy identify the PHOSTIN, a synthetic molecule that triggers phosphate starvation responses in Arabidopsis thaliana. New Phytol., 2016. 209(1): p. 161-76 [PMID:26243630] - Aleksza D,Horváth GV,Sándor G,Szabados L
Proline Accumulation Is Regulated by Transcription Factors Associated with Phosphate Starvation. Plant Physiol., 2017. 175(1): p. 555-567 [PMID:28765275]
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