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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00040.1_g00041.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
bZIP |
Protein Properties |
Length: 189aa MW: 21802.9 Da PI: 6.514 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00040.1_g00041.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 40.8 | 4.8e-13 | 72 | 122 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55
+++rr+ +NRe+ArrsR RK+ ++eL v+ L +eN++ ++l++ ++
Rsa1.0_00040.1_g00041.1 72 RKQRRMVSNRESARRSRMRKQRHLDELLSQVAWLRSENQQILERLNQASDS 122
689************************************999999887765 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 189 aa
Download sequence Send
to blast |
MQPNYDSSSL NNMQQQDYFH IHHYYNNLNP SNNNLNLIPY PQIQELNLQS PASNHSATSD 60 EATEDIFVIN ERKQRRMVSN RESARRSRMR KQRHLDELLS QVAWLRSENQ QILERLNQAS 120 DSNDLVLQEN SSLKEENLAL HQVITSMKKV IGAGGSRSIN GRYSSSSLDN DLDQDLSSIT 180 DDRRTHHPS
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |