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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00019.1_g00036.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 295aa MW: 33680.5 Da PI: 9.1415 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00019.1_g00036.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 101.9 | 3.6e-32 | 214 | 272 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver a+dpk+v++tYeg+H h
Rsa1.0_00019.1_g00036.1 214 LDDGYRWRKYGQKVVKNTQHPRSYYRCTQDKCRVKKRVERLADDPKMVITTYEGRHLHA 272
59******************************************************996 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:1901141 | Biological Process | regulation of lignin biosynthetic process |
GO:1904369 | Biological Process | positive regulation of sclerenchyma cell differentiation |
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MGTINQGISL YDEPQRIINP SRNHLGFFLS FPNQTLSSSP TSSPSLVSPF IGHHSLNSFL 60 QHNPPSCLTH PQDPINSMAN LPETLISISS LSASKQKDAH DTIVNLDHHR LNCGTSSRSS 120 LNQWAGSFQA EYGYSKKNNH GSEIHVYDID DDVGNGGRIN VDEDHQHNDT LRRHKHNTTP 180 VGVGCTLKMK KLKTRRKVRE PRFCFKTLSD VDVLDDGYRW RKYGQKVVKN TQHPRSYYRC 240 TQDKCRVKKR VERLADDPKM VITTYEGRHL HAPSNHLDDD SLSYSHHSHL SNFFW
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |