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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00010.1_g00031.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
NAC |
Protein Properties |
Length: 446aa MW: 50314.3 Da PI: 5.386 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00010.1_g00031.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 155.1 | 3e-48 | 22 | 147 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86
pGf+F+Ptd el+++yLk+k++g + ++ evi+e+diy++ePwdLp k++ ++++ew+fF++r kky++g++++r+tk gyWk t
Rsa1.0_00010.1_g00031.1 22 FPGFKFSPTDVELISYYLKRKMDGLERSV-EVIPETDIYNFEPWDLPdKSIVKSDTEWFFFCSRGKKYPHGSQNRRTTKMGYWKVT 106
69************************999.99***************778888999****************************** PP
NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
gk+++v+s +++++g+k+tLvf+ grapkg++t+W+mhey +
Rsa1.0_00010.1_g00031.1 107 GKERDVKS-SSQVIGTKRTLVFHIGRAPKGQRTEWLMHEYCM 147
********.999****************************86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 446 aa
Download sequence Send
to blast |
MEAVAVGVSK DMAASVEAST VFPGFKFSPT DVELISYYLK RKMDGLERSV EVIPETDIYN 60 FEPWDLPDKS IVKSDTEWFF FCSRGKKYPH GSQNRRTTKM GYWKVTGKER DVKSSSQVIG 120 TKRTLVFHIG RAPKGQRTEW LMHEYCMKGG VFMVHYSKDD ALVVCRLRRN REFRTYTSQK 180 APLEPDLAAD MHMILQNGDA NSGSPSDWES MVDFYLAGES WDNHVTETPE NLQVEAEEDF 240 YGDILRDDII NLDEVVMMRK APNEVPTLES ASMAIRILPL PNMIDRQMAS FLEQRLSQEN 300 KRKGSSGTEP LSSCFIGLYS IKTVNRARWD VIIGVVVLTF SYATAKSYSI IHPGNMNQQE 360 TASTLKLDLK LDILDSSLPI ESPSSSLCSE EAEGGEGVTK SMVVVGCPNC IMYIIMSLDN 420 NPRCPRCNSQ VLLDFLTRND SKKSIN
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3swm_A | 2e-39 | 23 | 171 | 22 | 169 | NAC domain-containing protein 19 |
3swm_B | 2e-39 | 23 | 171 | 22 | 169 | NAC domain-containing protein 19 |
3swm_C | 2e-39 | 23 | 171 | 22 | 169 | NAC domain-containing protein 19 |
3swm_D | 2e-39 | 23 | 171 | 22 | 169 | NAC domain-containing protein 19 |
3swp_A | 2e-39 | 23 | 171 | 22 | 169 | NAC domain-containing protein 19 |
3swp_B | 2e-39 | 23 | 171 | 22 | 169 | NAC domain-containing protein 19 |
3swp_C | 2e-39 | 23 | 171 | 22 | 169 | NAC domain-containing protein 19 |
3swp_D | 2e-39 | 23 | 171 | 22 | 169 | NAC domain-containing protein 19 |
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in plant cell division. {ECO:0000269|PubMed:16803883}. |